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    Y65B4A.7 LIM zinc-binding domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 190486, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y65B4A.7
    Official Full Name
    LIM zinc-binding domain-containing protein
    Primary source
    WormBase:WBGene00022030
    Locus tag
    CELE_Y65B4A.7
    See related
    AllianceGenome:WB:WBGene00022030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y65B4A.7 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (645626..647242, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene RNA helicase Neighboring gene ncRNA Neighboring gene Charged multivesicular body protein 6 Neighboring gene Peptidase C1A papain C-terminal domain-containing protein Neighboring gene RRM domain-containing protein Neighboring gene Cytidyltransferase-like domain-containing protein Neighboring gene Protein kinase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LIM zinc-binding domain-containing protein
    NP_001293248.1
    • Confirmed by transcript evidence
    NP_490764.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      645626..647242 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058363.5 → NP_490764.1  LIM zinc-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_490764.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9BL58
      Conserved Domains (1) summary
      cd09396
      Location:90 → 141
      LIM_DA1; The Lim domain of DA1

    2. NM_001306319.3 → NP_001293248.1  LIM zinc-binding domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293248.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      V6CKL2
      Conserved Domains (1) summary
      cd09396
      Location:29 → 80
      LIM_DA1; The Lim domain of DA1
    Nucleotide Protein
    Heading Accession and Version

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