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    Y37D8A.8 LITAF domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 189616, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y37D8A.8
    Official Full Name
    LITAF domain-containing protein
    Primary source
    WormBase:WBGene00012549
    Locus tag
    CELE_Y37D8A.8
    See related
    AllianceGenome:WB:WBGene00012549
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable zinc ion binding activity. Predicted to be located in endosome membrane and lysosomal membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y37D8A.8 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    4
    Sequence:
    Chromosome: III; NC_003281.10 (12864948..12867619)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene LITAF domain-containing protein Neighboring gene ncRNA Neighboring gene Mortality factor related protein 1 Neighboring gene Signal peptidase complex subunit 2 Neighboring gene Chromo domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    LITAF domain-containing protein
    NP_001317723.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      12864948..12867619
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001330976.3 → NP_001317723.1  LITAF domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWU7
      Conserved Domains (1) summary
      smart00714
      Location:63 → 129
      LITAF; Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF), also known as PIG7, and other animal proteins
    Nucleotide Protein
    Heading Accession and Version

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