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    dgn-3 Peptidase S72 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 184149, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dgn-3
    Official Full Name
    Peptidase S72 domain-containing protein
    Primary source
    WormBase:WBGene00017221
    Locus tag
    CELE_F07G6.1
    See related
    AllianceGenome:WB:WBGene00017221
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be part of dystrophin-associated glycoprotein complex. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See dgn-3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    3
    Sequence:
    Chromosome: X; NC_003284.9 (1729858..1733447)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Uncharacterized protein Neighboring gene Transposase Neighboring gene Saposin B-type domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. C. elegans dystroglycan DGN-1 functions in epithelia and neurons, but not muscle, and independently of dystrophin. Johnson RP, et al. Development, 2006 May. PMID 16611689
    2. Basement membranes. Kramer JM. WormBook, 2005 Sep 1. PMID 18050423, Free PMC Article
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    part_of dystrophin-associated glycoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Peptidase S72 domain-containing protein
    NP_508319.3
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      1729858..1733447
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_075918.3 → NP_508319.3  Peptidase S72 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q19173
      Conserved Domains (1) summary
      pfam05454
      Location:80 → 185
      DAG1; Dystroglycan (Dystrophin-associated glycoprotein 1)
    Nucleotide Protein
    Heading Accession and Version

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