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    arrd-7 Arrestin C-terminal-like domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174847, updated on 9-Dec-2024

    Summary

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    Official Symbol
    arrd-7
    Official Full Name
    Arrestin C-terminal-like domain-containing protein
    Primary source
    WormBase:WBGene00012464
    Locus tag
    CELE_Y17G7B.11
    See related
    AllianceGenome:WB:WBGene00012464
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in protein transport. Predicted to be active in cytoplasm. Orthologous to several human genes including ARRDC2 (arrestin domain containing 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See arrd-7 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (12060232..12062621, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Inositol-pentakisphosphate 2-kinase Neighboring gene NAD kinase 2, mitochondrial Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene C2H2-type domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    3. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article
    4. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Arrestin C-terminal-like domain-containing protein
    NP_496567.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      12060232..12062621 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064166.4 → NP_496567.2  Arrestin C-terminal-like domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496567.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XXI4
      Conserved Domains (3) summary
      smart01017
      Location:178 → 316
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      PRK14951
      Location:316 → 415
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      pfam00339
      Location:4 → 156
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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