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    ZK1098.3 Uncharacterized protein [ Caenorhabditis elegans ]

    Gene ID: 176346, updated on 9-Dec-2024

    Summary

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    Official Symbol
    ZK1098.3
    Official Full Name
    Uncharacterized protein
    Primary source
    WormBase:WBGene00014220
    Locus tag
    CELE_ZK1098.3
    See related
    AllianceGenome:WB:WBGene00014220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable 3'-5' exonuclease activity. Predicted to be involved in nucleobase-containing compound metabolic process. Predicted to be active in cytoplasm and nucleus. Orthologous to human EXD3 (exonuclease 3'-5' domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See ZK1098.3 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    6
    Sequence:
    Chromosome: III; NC_003281.10 (9531872..9538705, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Trafficking protein particle complex subunit 3 homolog Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene Exonuclease mut-7 Neighboring gene Translation initiation factor eIF2B subunit alpha

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables 3'-5' exonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables 3'-5' exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in nucleobase-containing compound metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Uncharacterized protein
    NP_499104.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      9531872..9538705 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066703.2 → NP_499104.1  Uncharacterized protein CELE_ZK1098.3 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_499104.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P34603
      Conserved Domains (2) summary
      cd06146
      Location:422 → 617
      mut-7_like_exo; DEDDy 3'-5' exonuclease domain of Caenorhabditis elegans mut-7 and similar proteins
      cl19501
      Location:676 → 752
      Mut7-C; Mut7-C RNAse domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P34603.2

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