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    osmF glycine betaine ABC transporter periplasmic binding protein OsmF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946681, updated on 3-Dec-2024

    Summary

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    Official Symbol
    osmF
    Official Full Name
    glycine betaine ABC transporter periplasmic binding protein OsmF
    Primary source
    ECOCYC:EG12012
    Locus tag
    b2131
    See related
    ASAP:ABE-0007040
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2124; yehZ
    Summary
    First 23 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG12012]. YehZ is the periplasmic binding component of an ABC transporter involved in osmoprotection. [More information is available at EcoCyc: EG12012].
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    Genomic context

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    Sequence:
    NC_000913.3 (2218564..2219481, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene UPF0387 family protein YohO Neighboring gene glycine betaine ABC transporter membrane subunit YehW Neighboring gene glycine betaine ABC transporter ATP binding subunit YehX Neighboring gene glycine betaine ABC transporter membrane subunit YehY Neighboring gene beta-D-glucoside glucohydrolase, periplasmic Neighboring gene quinone-dependent D-lactate dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The use of transposon TnphoA to detect genes for cell envelope proteins subject to a common regulatory stimulus. Analysis of osmotically regulated genes in Escherichia coli. Gutierrez C, et al. J Mol Biol, 1987 May 20. PMID 2821274
    2. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    3. Getting in or out: early segregation between importers and exporters in the evolution of ATP-binding cassette (ABC) transporters. Saurin W, et al. J Mol Evol, 1999 Jan. PMID 9873074
    4. Sigma(s)-dependent regulation of yehZYXW, which encodes a putative osmoprotectant ABC transporter of Escherichia coli. Checroun C, et al. FEMS Microbiol Lett, 2004 Jul 15. PMID 15251200
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    glycine betaine ABC transporter periplasmic binding protein OsmF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2218564..2219481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416635.1 glycine betaine ABC transporter periplasmic binding protein OsmF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416635.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N8NDQ8
      Conserved Domains (1) summary
      cd13616
      Location:26 → 299
      PBP2_OsmF; Substrate-binding domain OsmF of an osmoregulated ABC-type transporter; the type 2 periplasmic-binding protein fold
    Nucleotide Protein
    Heading Accession and Version

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