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    ygbM putative 2-oxo-tetronate isomerase YgbM [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947207, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ygbM
    Official Full Name
    putative 2-oxo-tetronate isomerase YgbM
    Primary source
    ECOCYC:G7420
    Locus tag
    b2739
    See related
    ASAP:ABE-0008996
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2734
    Summary
    A crystal structure of YgbM is presented . [More information is available at EcoCyc: G7420].
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    Genomic context

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    Sequence:
    NC_000913.3 (2864236..2865012)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative L-threonate dehydrogenase Neighboring gene putative 3-oxo-tetronate kinase YgbK Neighboring gene putative 3-oxo-tetronate 4-phosphate decarboxylase YgbL Neighboring gene putative transporter YgbN Neighboring gene RNA polymerase sigma factor RpoS

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of Escherichia coli EC1530, a glyoxylate induced protein YgbM. Kim Y, et al. Proteins, 2002 Aug 1. PMID 12112708, Free PMC Article
    2. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative 2-oxo-tetronate isomerase YgbM

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2864236..2865012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417219.1 putative 2-oxo-tetronate isomerase YgbM [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417219.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FZA3
      Conserved Domains (1) summary
      PRK09989
      Location:1 → 258
      PRK09989; HPr family phosphocarrier protein
    Nucleotide Protein
    Heading Accession and Version

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