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    PUS5 pseudouridine synthase PUS5 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 850862, updated on 9-Dec-2024

    Summary

    Official Symbol
    PUS5
    Official Full Name
    pseudouridine synthase PUS5
    Primary source
    SGD:S000004155
    Locus tag
    YLR165C
    See related
    AllianceGenome:SGD:S000004155; FungiDB:YLR165C; VEuPathDB:YLR165C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables pseudouridylate synthase activity. Involved in pseudouridine synthesis and rRNA modification. Located in mitochondrion. Orthologous to human RPUSD3 (RNA pseudouridine synthase D3) and RPUSD4 (RNA pseudouridine synthase D4). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See PUS5 in Genome Data Viewer
    Location:
    chromosome: XII
    Exon count:
    1
    Sequence:
    Chromosome: XII; NC_001144.5 (494494..495258, complement)

    Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene mitochondrial processing peptidase Neighboring gene protein SHH4 Neighboring gene exocyst subunit SEC10 Neighboring gene ubiquitin-ribosomal 40S subunit protein S31 fusion protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables 21S rRNA pseudouridine(2819) synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables pseudouridine synthase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables pseudouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables pseudouridylate synthase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in enzyme-directed rRNA pseudouridine synthesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in pseudouridine synthesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in rRNA modification IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 

    General protein information

    Preferred Names
    pseudouridine synthase PUS5
    NP_013266.1
    • Pseudouridine synthase; catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001144.5 Reference assembly

      Range
      494494..495258 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182052.1NP_013266.1  TPA: pseudouridine synthase PUS5 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_013266.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VYH1, Q06244
      UniProtKB/TrEMBL
      G2WJ00
      Conserved Domains (1) summary
      COG0564
      Location:4205
      RluA; Pseudouridylate synthase, 23S rRNA- or tRNA-specific [Translation, ribosomal structure and biogenesis]