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    MSC2 metal cation transporter MSC2 [ Saccharomyces cerevisiae S288C ]

    Gene ID: 851786, updated on 9-Dec-2024

    Summary

    Official Symbol
    MSC2
    Official Full Name
    metal cation transporter MSC2
    Primary source
    SGD:S000002613
    Locus tag
    YDR205W
    See related
    AllianceGenome:SGD:S000002613; FungiDB:YDR205W; VEuPathDB:YDR205W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables zinc ion transmembrane transporter activity. Involved in intracellular zinc ion homeostasis; transmembrane transport; and zinc ion transport. Located in endoplasmic reticulum. Orthologous to several human genes including SLC30A5 (solute carrier family 30 member 5). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See MSC2 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    1
    Sequence:
    Chromosome: IV; NC_001136.10 (859346..861520)

    Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Rav2p Neighboring gene ubiquinone biosynthesis protein COQ4 Neighboring gene Ebs1p Neighboring gene DNA-binding transcriptional regulator UME6

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables zinc ion binding RCA
    inferred from Reviewed Computational Analysis
    more info
    PubMed 
    enables zinc ion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables zinc ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in inorganic ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in intracellular monoatomic cation homeostasis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in intracellular zinc ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular zinc ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in intracellular zinc ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in zinc ion import into Golgi lumen IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in zinc ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in zinc ion transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasmic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum HDA PubMed 
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    metal cation transporter MSC2
    NP_010491.4
    • Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Zrg17p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; localizes to ER and nucleus; mutations affect the cellular distribution of zinc and also confer defects in meiotic recombination between homologous chromatids

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001136.10 Reference assembly

      Range
      859346..861520
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001180513.3NP_010491.4  TPA: metal cation transporter MSC2 [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_010491.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VSI6, Q03455
      UniProtKB/TrEMBL
      C7GMZ4, N1P6U4
      Conserved Domains (1) summary
      COG1230
      Location:378673
      CzcD; Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]