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    cobD cobalamin biosynthesis protein CobD [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881384, updated on 11-Sep-2024

    Summary

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    Gene symbol
    cobD
    Gene description
    cobalamin biosynthesis protein CobD
    Locus tag
    PA1275
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1386323..1387261)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene cob(I)yrinic acid a,c-diamide adenosyltransferase Neighboring gene hydrogenobyrinate a,c-diamide synthase Neighboring gene 5,6-dimethylbenzimidazole synthase Neighboring gene threonine-phosphate decarboxylase Neighboring gene cobyric acid synthase Neighboring gene bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase Neighboring gene nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of a Pseudomonas denitrificans 5.4-kilobase DNA fragment containing five cob genes and identification of structural genes encoding S-adenosyl-L-methionine: uroporphyrinogen III methyltransferase and cobyrinic acid a,c-diamide synthase. Crouzet J, et al. J Bacteriol, 1990 Oct. PMID 2211520, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within cobalamin biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cobalamin biosynthesis protein CobD
    NP_249966.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1386323..1387261
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249966.1 cobalamin biosynthesis protein CobD [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249966.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9I469
      Conserved Domains (1) summary
      PRK01209
      Location:1 → 291
      cobD; cobalamin biosynthesis protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9I469.1

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