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    rplD 50S ribosomal protein L4 [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881754, updated on 24-Aug-2024

    Summary

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    Gene symbol
    rplD
    Gene description
    50S ribosomal protein L4
    Locus tag
    PA4262
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4766009..4766611, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S19 Neighboring gene 50S ribosomal protein L2 Neighboring gene 50S ribosomal protein L23 Neighboring gene 50S ribosomal protein L3 Neighboring gene 30S ribosomal protein S10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure of the Escherichia coli S10 ribosomal protein operon. Zurawski G, et al. Nucleic Acids Res, 1985 Jun 25. PMID 3892488, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within translation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    50S ribosomal protein L4
    NP_252952.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4766009..4766611 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252952.1 50S ribosomal protein L4 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252952.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9HWD6
      Conserved Domains (1) summary
      PRK05319
      Location:3 → 200
      rplD; 50S ribosomal protein L4; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9HWD6.1

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