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    algZ alginate biosynthesis protein AlgZ/FimS [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879635, updated on 11-Sep-2024

    Summary

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    Gene symbol
    algZ
    Gene description
    alginate biosynthesis protein AlgZ/FimS
    Locus tag
    PA5262
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (5923295..5924371, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene uroporphyrinogen-III synthase Neighboring gene porphobilinogen deaminase Neighboring gene alginate biosynthesis regulatory protein AlgR Neighboring gene argininosuccinate lyase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pseudomonas aeruginosa AlgR controls cyanide production in an AlgZ-dependent manner. Cody WL, et al. J Bacteriol, 2009 May. PMID 19270096, Free PMC Article
    2. Expression analysis of the Pseudomonas aeruginosa AlgZR two-component regulatory system. Pritchett CL, et al. J Bacteriol, 2015 Feb 15. PMID 25488298, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AlgZ and algR transcription involves multiple factors at multiple start sites that control individual gene expression.
      Title: Expression analysis of the Pseudomonas aeruginosa AlgZR two-component regulatory system.
    2. Strains lacking AlgR or the putative AlgR sensor AlgZ produced significantly less hydrogen cyanide than did a nonmucoid isogenic parent.
      Title: Pseudomonas aeruginosa AlgR controls cyanide production in an AlgZ-dependent manner.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    alginate biosynthesis protein AlgZ/FimS
    NP_253949.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      5923295..5924371 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_253949.1 alginate biosynthesis protein AlgZ/FimS [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_253949.1

      Status: PROVISIONAL

      Conserved Domains (1) summary
      COG2972
      Location:1 → 356
      YesM; Sensor histidine kinase YesM [Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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