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    Anxa11 annexin A11 [ Mus musculus (house mouse) ]

    Gene ID: 11744, updated on 27-Nov-2024

    Summary

    Official Symbol
    Anxa11provided by MGI
    Official Full Name
    annexin A11provided by MGI
    Primary source
    MGI:MGI:108481
    See related
    Ensembl:ENSMUSG00000021866 AllianceGenome:MGI:108481
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Anx11; Gm2260; Gm2274; 100039484; 100039503; A830099O17Rik
    Summary
    Enables calcium ion binding activity; calcium-dependent phospholipid binding activity; and phosphatidylethanolamine binding activity. Predicted to be involved in cytokinetic process; phagocytosis; and response to calcium ion. Located in cytoplasm. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; respiratory system; and sensory organ. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 23 and inclusion body myopathy and brain white matter abnormalities. Orthologous to human ANXA11 (annexin A11). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in colon adult (RPKM 118.5), duodenum adult (RPKM 56.1) and 20 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Anxa11 in Genome Data Viewer
    Location:
    14 A3; 14 15.06 cM
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (25842575..25887228)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (25842127..25886804)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1700054O19 gene Neighboring gene STARR-seq mESC enhancer starr_36222 Neighboring gene zinc finger, CCHC domain containing 24 Neighboring gene STARR-positive B cell enhancer mm9_chr14:26567064-26567365 Neighboring gene STARR-seq mESC enhancer starr_36224 Neighboring gene STARR-seq mESC enhancer starr_36226 Neighboring gene STARR-seq mESC enhancer starr_36227 Neighboring gene placenta specific 9 Neighboring gene predicted gene, 57811 Neighboring gene transmembrane protein 254

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables S100 protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables S100 protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables calcium ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables calcium-dependent phospholipid binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calcium-dependent phospholipid binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables calcium-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables calcium-dependent protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables phosphatidylethanolamine binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phosphatidylserine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in cytokinetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cytokinetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cytokinetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in phagocytosis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in phagocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to calcium ion ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in azurophil granule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in azurophil granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in collagen-containing extracellular matrix HDA PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in melanosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in midbody ISO
    Inferred from Sequence Orthology
    more info
     
    located_in midbody ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear envelope ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in phagocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in phagocytic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in specific granule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in specific granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in spindle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in spindle ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in vesicle membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    annexin A11
    Names
    Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50) (CAP-50)
    CAP-50
    annexin XI
    annexin-11
    calcyclin-associated annexin 50

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_013469.2NP_038497.2  annexin A11

      See identical proteins and their annotated locations for NP_038497.2

      Status: VALIDATED

      Source sequence(s)
      AK137158, AK140375, BQ174399, BY723474
      Consensus CDS
      CCDS26875.1
      UniProtKB/Swiss-Prot
      P97384, Q921F1
      Related
      ENSMUSP00000022416.8, ENSMUST00000022416.15
      Conserved Domains (2) summary
      pfam02389
      Location:120185
      Cornifin; Cornifin (SPRR) family
      pfam00191
      Location:202267
      Annexin

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      25842575..25887228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006518451.5XP_006518514.1  annexin A11 isoform X1

      See identical proteins and their annotated locations for XP_006518514.1

      UniProtKB/Swiss-Prot
      P97384, Q921F1
      Conserved Domains (2) summary
      pfam02389
      Location:120185
      Cornifin; Cornifin (SPRR) family
      pfam00191
      Location:202267
      Annexin