U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Prkag2os1 protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1 [ Mus musculus (house mouse) ]

    Gene ID: 71161, updated on 17-Aug-2024

    Summary

    Official Symbol
    Prkag2os1provided by MGI
    Official Full Name
    protein kinase, AMP-activated, gamma 2 non-catalytic subunit, opposite strand 1provided by MGI
    Primary source
    MGI:MGI:1918411
    See related
    Ensembl:ENSMUSG00000086446 AllianceGenome:MGI:1918411
    Gene type
    ncRNA
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933426D04Rik
    Expression
    Biased expression in testis adult (RPKM 7.3), cerebellum adult (RPKM 0.5) and 1 other tissue See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Prkag2os1 in Genome Data Viewer
    Location:
    5 A3; 5 11.95 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (25107567..25111847)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (24902569..24906849)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_12648 Neighboring gene STARR-seq mESC enhancer starr_12649 Neighboring gene predicted gene, 33591 Neighboring gene crystallin, gamma N Neighboring gene Ras homolog enriched in brain Neighboring gene STARR-positive B cell enhancer ABC_E666 Neighboring gene STARR-seq mESC enhancer starr_12651 Neighboring gene protein kinase, AMP-activated, gamma 2 non-catalytic subunit Neighboring gene predicted gene, 52767 Neighboring gene RIKEN cDNA 1500035N22 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Other Names

    • Prkag2 opposite strand transcript 1

    Clone Names

    • AC125270.3

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_040684.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AC125270, AK016926
      Related
      ENSMUST00000134633.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      25107567..25111847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)