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    kdgT 2-dehydro-3-deoxy-D-gluconate:H(+) symporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948407, updated on 17-Dec-2024

    Summary

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    Official Symbol
    kdgT
    Official Full Name
    2-dehydro-3-deoxy-D-gluconate:H(+) symporter
    Primary source
    ECOCYC:EG11869
    Locus tag
    b3909
    See related
    ASAP:ABE-0012764
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3902
    Summary
    KdgT is a probable 2-keto-3-deoxy-D-gluconate (KDG) uptake system. [More information is available at EcoCyc: EG11869].
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    Genomic context

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    Sequence:
    NC_000913.3 (4101690..4102673)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional activator RhaR Neighboring gene rhamnose/lyxose:H(+) symporter Neighboring gene superoxide dismutase (Mn) Neighboring gene 6-hydroxyaminopurine reductase Neighboring gene sensor histidine kinase CpxA Neighboring gene DNA-binding transcriptional dual regulator CpxR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Construction and expression of hybrid plasmids containing the structural gene of the Escherichia coli K-12 3-deoxy-2-oxo-D-gluconate transport system. Mandrand-Berthelot MA, et al. J Bacteriol, 1984 Nov. PMID 6094479, Free PMC Article
    2. Proton uptake linked to the 3-deoxy-2-oxo-d-gluconate-transport system of Escherichia coli. Lagarde AE, et al. Biochem J, 1977 Jan 15. PMID 15555, Free PMC Article
    3. [A common pathway for hexouronate degradation in Escherichia coli K 12. Induction mechanism of 2-keto-3-deoxy-gluconate metabolizing enzymes]. Pouysségur JM, et al. Eur J Biochem, 1972 Nov 7. PMID 4565407
    4. Genetical analysis of fructose utilization by Escherichia coli. Jones-Mortimer MC, et al. Proc R Soc Lond B Biol Sci, 1974 Sep 17. PMID 4154035
    5. Comparative genomics of the KdgR regulon in Erwinia chrysanthemi 3937 and other gamma-proteobacteria. Rodionov DA, et al. Microbiology (Reading), 2004 Nov. PMID 15528647

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 2-keto-3-deoxygluconate:proton symporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables 2-keto-3-deoxygluconate:proton symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in 2-keto-3-deoxygluconate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in carbohydrate transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within gluconate transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    2-dehydro-3-deoxy-D-gluconate:H(+) symporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4101690..4102673
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418345.2 2-dehydro-3-deoxy-D-gluconate:H(+) symporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418345.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B1LMV1
      Conserved Domains (1) summary
      PRK05274
      Location:1 → 321
      PRK05274; 2-keto-3-deoxygluconate permease; Provisional
    Nucleotide Protein
    Heading Accession and Version

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