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    yjiS DUF1127 domain-containing protein YjiS [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948903, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjiS
    Official Full Name
    DUF1127 domain-containing protein YjiS
    Primary source
    ECOCYC:G7937
    Locus tag
    b4341
    See related
    ASAP:ABE-0014236
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4332
    Summary
    yjiA and yjiS are widely shared genes flanking the variable Immigration Control Region (ICR) restriction-modification cassettes of enterobacterial genomes. [More information is available at EcoGene: EG12580]. The yjiS gene defines the left border of the Immigration Control Region (ICR), and yjiA defines the right border . [More information is available at EcoCyc: G7937].
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    Genomic context

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    Sequence:
    NC_000913.3 (4571751..4571915)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene fused putative DNA-binding transcriptional regulator/putative aminotransferase YjiR Neighboring gene putative uncharacterized protein YjiT Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cassette-like variation of restriction enzyme genes in Escherichia coli C and relatives. Sibley MH, et al. Nucleic Acids Res, 2004. PMID 14744977, Free PMC Article
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    DUF1127 domain-containing protein YjiS

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4571751..4571915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418761.1 DUF1127 domain-containing protein YjiS [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418761.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5N8H677
      Conserved Domains (1) summary
      COG5457
      Location:1 → 54
      YjiS; Uncharacterized conserved protein YjiS, DUF1127 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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