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    CG42570 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 8674011, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG42570provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0260776
    Locus tag
    Dmel_CG42570
    See related
    AllianceGenome:FB:FBgn0260776
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG42570; new ORF
    Orthologs
    all
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    Genomic context

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    See CG42570 in Genome Data Viewer
    Location:
    71F2-71F2; 3-43 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15717819..15720073)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15710919..15713173)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene comm2 Neighboring gene uncharacterized protein Neighboring gene commissureless Neighboring gene long non-coding RNA:CR45240

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    2. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
    3. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    4. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article
    5. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867, Free PMC Article

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG42570-PA
    CG42570-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      15717819..15720073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169978.2 → NP_001163449.1  uncharacterized protein Dmel_CG42570, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D0IQA3
      Conserved Domains (1) summary
      cd06174
      Location:17 → 235
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

    2. NM_001274961.1 → NP_001261890.1  uncharacterized protein Dmel_CG42570, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261890.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFC9
      Conserved Domains (1) summary
      cd06174
      Location:17 → 235
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    D0IQA3 D0IQA3
    M9PFC9 M9PFC9

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