U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG13887 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38096, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG13887provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035165
    Locus tag
    Dmel_CG13887
    See related
    AllianceGenome:FB:FBgn0035165
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13887
    Summary
    Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. Located in endomembrane system. Is expressed in several structures, including adult head; adult heart; embryonic/larval salivary gland; germline cell; and salivary gland body primordium. Human ortholog(s) of this gene implicated in deafness, dystonia, and cerebral hypomyelination and sensorineural hearing loss. Orthologous to human BCAP29 (B cell receptor associated protein 29) and BCAP31 (B cell receptor associated protein 31). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG13887 in Genome Data Viewer
    Location:
    61D2-61D2; 3-0.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (837861..839931)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (837861..839931)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Jumonji domain containing 5 Neighboring gene Gustatory receptor 61a

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. PINK1 and Parkin regulate IP(3)R-mediated ER calcium release. Ham SJ, et al. Nat Commun, 2023 Aug 25. PMID 37626046, Free PMC Article
    2. Amyloid fibril proteomics of AD brains reveals modifiers of aggregation and toxicity. Upadhyay A, et al. Mol Neurodegener, 2023 Sep 14. PMID 37710351, Free PMC Article
    3. Aβ42 Expressing Drosophila melanogaster Model for Alzheimer's Disease: Quantitative Proteomics Identifies Altered Protein Dynamics of Relevance to Neurodegeneration. Deolankar SC, et al. OMICS, 2022 Jan. PMID 35006003
    4. Drosophila Gut Immune Pathway Suppresses Host Development-Promoting Effects of Acetic Acid Bacteria. Lee J, et al. Mol Cells, 2023 Oct 31. PMID 37853687, Free PMC Article
    5. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436, Free PMC Article

    See all (44) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in protein localization to endoplasmic reticulum exit site IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in endomembrane system HDA PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG13887-PB
    CG13887-PC
    CG13887-PD
    CG13887-PE

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      837861..839931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299962.1 → NP_001286891.1  uncharacterized protein Dmel_CG13887, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286891.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0M4
      Conserved Domains (1) summary
      pfam05529
      Location:1 → 205
      Bap31; B-cell receptor-associated protein 31-like

    2. NM_138218.3 → NP_612062.1  uncharacterized protein Dmel_CG13887, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_612062.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0M4
      Related
      FBpp0072481
      Conserved Domains (1) summary
      pfam05529
      Location:1 → 205
      Bap31; B-cell receptor-associated protein 31-like

    3. NM_001259609.2 → NP_001246538.1  uncharacterized protein Dmel_CG13887, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246538.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B8A3Z7, B9EQV3
      Conserved Domains (1) summary
      pfam05529
      Location:1 → 181
      Bap31; B-cell receptor-associated protein 31-like

    4. NM_167843.2 → NP_728548.1  uncharacterized protein Dmel_CG13887, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728548.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W0M4
      Related
      FBpp0072480
      Conserved Domains (1) summary
      pfam05529
      Location:1 → 205
      Bap31; B-cell receptor-associated protein 31-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B9EQV3 B9EQV3
    Q9W0M4 Q9W0M4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools