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    Ubi-p5E Ubiquitin-5E [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326237, updated on 9-Dec-2024

    Summary

    Official Symbol
    Ubi-p5Eprovided by FlyBase
    Official Full Name
    Ubiquitin-5Eprovided by FlyBase
    Primary source
    FLYBASE:FBgn0086558
    Locus tag
    Dmel_CG32744
    See related
    AllianceGenome:FB:FBgn0086558
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG18282; CG32744; CR32744; Dmel\CG32744; DmUb; DmUbi-p5E; Ub; UB; Ubi; Ubiq
    Old locus tag
    CG32744
    Summary
    Predicted to enable protein tag activity and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in protein ubiquitination and ubiquitin-dependent protein catabolic process. Located in polytene chromosome band. Is expressed in organism and testis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Ubi-p5E in Genome Data Viewer
    Location:
    5E4-5E4; 1-16 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6276876..6279647, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6170909..6173680, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene schlank Neighboring gene Josephin domain containing Neighboring gene Spt6 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45530 Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein tag activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein tag activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ubiquitin protein ligase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in modification-dependent protein catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein modification process ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in protein ubiquitination IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein ubiquitination ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in ubiquitin-dependent protein catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in polytene chromosome band IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Ubiquitin-5E
    Names
    CG32744-PA
    CG32744-PB
    Ubi-p5E-PA
    Ubi-p5E-PB
    ubiquitin

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      6276876..6279647 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298008.1NP_001284937.1  Ubiquitin-5E, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284937.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W418
      Conserved Domains (1) summary
      cd01803
      Location:77152
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin
    2. NM_167065.3NP_727078.1  Ubiquitin-5E, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727078.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W418
      Related
      FBpp0070894
      Conserved Domains (1) summary
      cd01803
      Location:77152
      Ubl_ubiquitin; ubiquitin-like (Ubl) domain found in ubiquitin