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    ATPsynepsilonL ATP synthase, epsilon subunit-like [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326144, updated on 9-Dec-2024

    Summary

    Official Symbol
    ATPsynepsilonLprovided by FlyBase
    Official Full Name
    ATP synthase, epsilon subunit-likeprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051477
    Locus tag
    Dmel_CG31477
    See related
    AllianceGenome:FB:FBgn0051477
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    ATPE; CG12810; CG31477; Dmel\CG31477
    Summary
    Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis and proton transmembrane transport. Predicted to be part of proton-transporting ATP synthase, central stalk. Predicted to be active in mitochondrial inner membrane. Is expressed in adult head. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 3. Orthologous to human ATP5F1E (ATP synthase F1 subunit epsilon) and ATP5F1EP2 (ATP synthase F1 subunit epsilon pseudogene 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ATPsynepsilonL in Genome Data Viewer
    Location:
    85F13-85F13; 3-49 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10121773..10122320)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5947495..5948042)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Carbonic anhydrase 7 Neighboring gene gamma Soluble NSF attachment protein 2 Neighboring gene antisense RNA:CR46038 Neighboring gene knickkopf Neighboring gene twins

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in proton motive force-driven ATP synthesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proton motive force-driven ATP synthesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in proton motive force-driven mitochondrial ATP synthesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in proton transmembrane transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    is_active_in mitochondrial inner membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of proton-transporting ATP synthase complex, catalytic core F(1) IEA
    Inferred from Electronic Annotation
    more info
     
    part_of proton-transporting ATP synthase complex, catalytic core F(1) ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    part_of proton-transporting ATP synthase, central stalk ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    ATP synthase, epsilon subunit-like
    Names
    ATP synthase epsilon chain
    ATPsynepsilonL-PA
    ATPsynepsilonL-PB
    ATPsynepsilonL-PC
    CG31477-PA
    CG31477-PB
    CG31477-PC

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10121773..10122320
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001104266.3NP_001097736.1  ATP synthase, epsilon subunit-like, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097736.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4C9, Q9VH24
      Conserved Domains (1) summary
      pfam04627
      Location:350
      ATP-synt_Eps; Mitochondrial ATP synthase epsilon chain
    2. NM_001275520.1NP_001262449.1  ATP synthase, epsilon subunit-like, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4C9, Q9VH24
      Conserved Domains (1) summary
      pfam04627
      Location:350
      ATP-synt_Eps; Mitochondrial ATP synthase epsilon chain
    3. NM_169328.3NP_731449.1  ATP synthase, epsilon subunit-like, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731449.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V4C9, Q9VH24
      Related
      FBpp0081658
      Conserved Domains (1) summary
      pfam04627
      Location:350
      ATP-synt_Eps; Mitochondrial ATP synthase epsilon chain