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    fidipidine fidipidine [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36808, updated on 9-Dec-2024

    Summary

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    Official Symbol
    fidipidineprovided by FlyBase
    Official Full Name
    fidipidineprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025519
    Locus tag
    Dmel_CG7773
    See related
    AllianceGenome:FB:FBgn0025519
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7773; Dmel\CG7773
    Summary
    Predicted to be involved in Golgi to plasma membrane transport. Is expressed in adult head. Orthologous to human CCDC93 (coiled-coil domain containing 93). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See fidipidine in Genome Data Viewer
    Location:
    53A2-53A3; 2-79 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16262284..16264619, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12149789..12152124, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Cyclic nucleotide-gated ion channel subunit A Neighboring gene capsuleen Neighboring gene Kinesin heavy chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arginine methyltransferase Capsuleen is essential for methylation of spliceosomal Sm proteins and germ cell formation in Drosophila. Anne J, et al. Development, 2007 Jan. PMID 17164419
    2. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    3. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article
    4. A protein complex network of Drosophila melanogaster. Guruharsha KG, et al. Cell, 2011 Oct 28. PMID 22036573, Free PMC Article
    5. Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes. Phanse S, et al. Data Brief, 2016 Mar. PMID 26870755, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    fidipidine
    Names
    CG7773-PA
    fidipidine-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16262284..16264619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079036.5 → NP_523760.1  fidipidine [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_523760.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZAC7, O77293
      Related
      FBpp0086329
      Conserved Domains (1) summary
      pfam09762
      Location:42 → 219
      KOG2701; Coiled-coil domain-containing protein (DUF2037)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZAC7 A1ZAC7
    O77293 O77293

    Gene LinkOut

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