U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG4480 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34864, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG4480provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032553
    Locus tag
    Dmel_CG4480
    See related
    AllianceGenome:FB:FBgn0032553
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG4480
    Summary
    Predicted to be active in membrane. Is expressed in adult head; early elongation stage spermatid; primary spermatocyte; and secondary spermatocyte. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG4480 in Genome Data Viewer
    Location:
    35B6-35B6; 2-50 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (14870371..14872022, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (14870371..14872022, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45727 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Distinct functions of Mst77F and protamines in nuclear shaping and chromatin condensation during Drosophila spermiogenesis. Rathke C, et al. Eur J Cell Biol, 2010 Apr. PMID 20138392
    2. Transition from a nucleosome-based to a protamine-based chromatin configuration during spermiogenesis in Drosophila. Rathke C, et al. J Cell Sci, 2007 May 1. PMID 17452629
    3. Gene expression profiling implicates OXPHOS complexes in lifespan extension of flies over-expressing a small mitochondrial chaperone, Hsp22. Kim HJ, et al. Exp Gerontol, 2010 Aug. PMID 20036725
    4. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
    5. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG4480-PB
    CG4480-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      14870371..14872022 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001201885.1 → NP_001188814.1  uncharacterized protein Dmel_CG4480, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001188814.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0PTU1, C3KGJ9, Q9VJR3
      Conserved Domains (1) summary
      pfam04750
      Location:79 → 230
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    2. NM_135883.2 → NP_609727.2  uncharacterized protein Dmel_CG4480, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609727.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0PTU1, C3KGJ9, Q9VJR3
      Conserved Domains (1) summary
      pfam04750
      Location:79 → 230
      Far-17a_AIG1; FAR-17a/AIG1-like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VJR3 Q9VJR3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools