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    CG33217 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 2768951, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG33217provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0053217
    Locus tag
    Dmel_CG33217
    See related
    AllianceGenome:FB:FBgn0053217
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE15216; Dmel\CG33217
    Summary
    Predicted to be involved in rRNA processing. Predicted to be active in nucleus. Is expressed in several structures, including adult head; anterior endoderm; embryonic/larval midgut primordium; germline cell; and visceral muscle cell. Orthologous to human PELP1 (proline, glutamate and leucine rich protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG33217 in Genome Data Viewer
    Location:
    80D2-80D2; 3-47 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (23126025..23132209)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (23119125..23125309)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Ribosomal protein L10 Neighboring gene casein kinase IIalpha Neighboring gene pseudo Neighboring gene antisense RNA:CR45164 Neighboring gene Vacuolar protein sorting 11

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Whole transcriptome screening for novel genes involved in meiosis and fertility in Drosophila melanogaster. Sun S, et al. Sci Rep, 2024 Feb 13. PMID 38351116, Free PMC Article
    2. Stable intronic sequence RNAs have possible regulatory roles in Drosophila melanogaster. Pek JW, et al. J Cell Biol, 2015 Oct 26. PMID 26504165, Free PMC Article
    3. Genetic and Molecular Analysis of Essential Genes in Centromeric Heterochromatin of the Left Arm of Chromosome 3 in Drosophila melanogaster. Syrzycka M, et al. G3 (Bethesda), 2019 May 7. PMID 30948422, Free PMC Article
    4. Genes Relocated Between Drosophila Chromosome Arms Evolve Under Relaxed Selective Constraints Relative to Non-Relocated Genes. Hart MLI, et al. J Mol Evol, 2018 Jul. PMID 29926120
    5. Comparative interactome analysis of α-arrestin families in human and Drosophila. Lee KT, et al. Elife, 2024 Jan 25. PMID 38270169, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 23128851-23129583 mobile_element_type = transposon:HB{}3944
    • Loc: 23129587-23129727 mobile_element_type = transposon:INE-1{}3366
    • Loc: 23130102-23130365 mobile_element_type = transposon:1360{}3899
    • Loc: 23130371-23130403 mobile_element_type = transposon:INE-1{}3368

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in rRNA processing IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG33217-PA
    NP_996147.1
    • unusual splice

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      23126025..23132209
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_206425.3 → NP_996147.1  uncharacterized protein Dmel_CG33217 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996147.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MS38
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MS38 Q8MS38

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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