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    LOC100129175 uncharacterized LOC100129175 [ Homo sapiens (human) ]

    Gene ID: 100129175, updated on 10-Dec-2024

    Summary

    Gene symbol
    LOC100129175
    Gene description
    uncharacterized LOC100129175
    See related
    Ensembl:ENSG00000224090
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LOC100129175 in Genome Data Viewer
    Location:
    2q35
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (219002215..219015722)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (219490590..219504097)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (219866937..219880444)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene crystallin beta A2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12339 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:219864283-219865266 Neighboring gene Sharpr-MPRA regulatory region 4963 Neighboring gene microRNA 375 Neighboring gene cilia and flagella associated protein 65 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:219889982-219890482 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17138 Neighboring gene uncharacterized LOC107985987 Neighboring gene Indian hedgehog signaling molecule Neighboring gene microRNA 3131

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_046086.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC097468, AK092605, BF110506
      Related
      ENST00000441450.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      219002215..219015722
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      219490590..219504097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)