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    LOC102723831 uncharacterized LOC102723831 [ Homo sapiens (human) ]

    Gene ID: 102723831, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC102723831
    Gene description
    uncharacterized LOC102723831
    See related
    Ensembl:ENSG00000223598
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC102723831 in Genome Data Viewer
    Location:
    6q25.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (151196673..151228457, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (152397289..152429072, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (151517808..151549592, complement)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like Neighboring gene uncharacterized LOC124901432 Neighboring gene Sharpr-MPRA regulatory region 10334 Neighboring gene ribosomal protein L32 pseudogene 16 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:151450407-151451398 Neighboring gene microRNA 12131 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:151485034-151485534 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:151485535-151486035 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:151529211-151529710 Neighboring gene RNA, U6 small nuclear 300, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr6:151550445-151550650 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:151560905-151561414 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:151561492-151562069 Neighboring gene ribosomal protein S12 pseudogene 11 Neighboring gene A-kinase anchoring protein 12 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25279 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25280 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr6:151612052-151612552 Neighboring gene RNA, U6 small nuclear 1247, pseudogene Neighboring gene RNY4 pseudogene 20

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125868.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC031960
      Related
      ENST00000772827.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      151196673..151228457 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      152397289..152429072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials