U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG31211 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41443, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG31211provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051211
    Locus tag
    Dmel_CG31211
    See related
    AllianceGenome:FB:FBgn0051211
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO03070958.3; cDNA; CG14732; CG18546; Dmel\CG31211
    Summary
    Predicted to be active in nuclear speck and presynaptic active zone. Orthologous to human PNISR (PNN interacting serine and arginine rich protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG31211 in Genome Data Viewer
    Location:
    87A2-87A2; 3-51 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11949680..11954038)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7775402..7779760)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Cadherin 87A Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Heat shock protein 70 Aa Neighboring gene Heat shock protein 70 Ab Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Are scs and scs' 'neutral' chromatin domain boundaries of the locus? Avramova Z, et al. Trends Genet, 1999 Apr. PMID 10203820
    2. New properties of Drosophila scs and scs' insulators. Kyrchanova O, et al. PLoS One, 2013. PMID 23638134, Free PMC Article
    3. Studies of the role of the Drosophila scs and scs' insulators in defining boundaries of a chromosome puff. Kuhn EJ, et al. Mol Cell Biol, 2004 Feb. PMID 14749365, Free PMC Article
    4. Remarkable site specificity of local transposition into the Hsp70 promoter of Drosophila melanogaster. Shilova VY, et al. Genetics, 2006 Jun. PMID 16582443, Free PMC Article
    5. Hsp70 duplication in the Drosophila melanogaster species group: how and when did two become five? Bettencourt BR, et al. Mol Biol Evol, 2001 Jul. PMID 11420366

    See all (40) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in nuclear speck IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in presynaptic active zone IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG31211-PA
    CG31211-PB
    CG31211-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11949680..11954038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_176464.2 → NP_788641.1  uncharacterized protein Dmel_CG31211, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788641.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86B99
      Related
      FBpp0081954
      Conserved Domains (1) summary
      pfam15996
      Location:290 → 493
      PNISR; Arginine/serine-rich protein PNISR

    2. NM_141874.3 → NP_650131.1  uncharacterized protein Dmel_CG31211, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650131.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960U0, Q9VGG3
      Related
      FBpp0081953
      Conserved Domains (1) summary
      pfam15996
      Location:290 → 493
      PNISR; Arginine/serine-rich protein PNISR

    3. NM_176465.2 → NP_788642.1  uncharacterized protein Dmel_CG31211, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788642.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q86B98
      Related
      FBpp0081955
      Conserved Domains (1) summary
      pfam15996
      Location:290 → 488
      PNISR; Arginine/serine-rich protein PNISR
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q86B98 Q86B98
    Q86B99 Q86B99
    Q9VGG3 Q9VGG3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools