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    BG642312 BG642312 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 4379909, updated on 9-Dec-2024

    Summary

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    Official Symbol
    BG642312provided by FlyBase
    Official Full Name
    BG642312provided by FlyBase
    Primary source
    FLYBASE:FBgn0047334
    Locus tag
    Dmel_CG33943
    See related
    AllianceGenome:FB:FBgn0047334
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    4h1; BcDNA:AT24650; BG642312(4h1); CG33943; CR33943; Dmel\CG33943; pncr010:3L
    Summary
    Involved in regulation of egg-laying behavior. Located in extracellular space. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See BG642312 in Genome Data Viewer
    Location:
    65A10-65A10; 3-16 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (6232469..6233381, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (6225569..6226481, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A network of interactions among seminal proteins underlies the long-term postmating response in Drosophila. Ram KR, et al. Proc Natl Acad Sci U S A, 2009 Sep 8. PMID 19706411, Free PMC Article
    2. A dual role of lola in Drosophila ovary development: regulating stem cell niche establishment and repressing apoptosis. Zhao T, et al. Cell Death Dis, 2022 Sep 2. PMID 36056003, Free PMC Article
    3. Identification of putative noncoding polyadenylated transcripts in Drosophila melanogaster. Tupy JL, et al. Proc Natl Acad Sci U S A, 2005 Apr 12. PMID 15809421, Free PMC Article
    4. An ectopic expression screen reveals the protective and toxic effects of Drosophila seminal fluid proteins. Mueller JL, et al. Genetics, 2007 Feb. PMID 17110486, Free PMC Article
    5. Sustained post-mating response in Drosophila melanogaster requires multiple seminal fluid proteins. Ram KR, et al. PLoS Genet, 2007 Dec. PMID 18085830, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of egg-laying behavior IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in sexual reproduction HEP PubMed 
    Component Evidence Code Pubs
    located_in extracellular space HDA PubMed 
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BG642312
    Names
    BG642312-PA
    BG642312-PB
    CG33943-PA
    CG33943-PB
    putative noncoding RNA 010:3L

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      6232469..6233381 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001202123.1 → NP_001189052.1  BG642312, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001189052.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8H8, Q8T964
      Conserved Domains (1) summary
      TIGR03700
      Location:30 → 62
      mena_SCO4494; putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family

    2. NM_001043122.2 → NP_001036587.1  BG642312, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036587.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0E8H8, Q8T964
      Conserved Domains (1) summary
      TIGR03700
      Location:30 → 62
      mena_SCO4494; putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0E8H8 Q0E8H8

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