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    Uvrag UV-resistance associated gene [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34735, updated on 9-Dec-2024

    Summary

    Official Symbol
    Uvragprovided by FlyBase
    Official Full Name
    UV-resistance associated geneprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032499
    Locus tag
    Dmel_CG6116
    See related
    AllianceGenome:FB:FBgn0032499
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG6116; Dmel\CG6116; dUVRAG; uvrag; UVRAG; Vps38
    Summary
    Predicted to enable SNARE binding activity. Involved in several processes, including imaginal disc-derived male genitalia morphogenesis; negative regulation of Notch signaling pathway; and neuron remodeling. Predicted to be active in endosome and lytic vacuole. Is expressed in embryonic/larval garland cell; garland cell primordium; head mesoderm; organism; and trunk mesoderm. Used to study colorectal cancer. Orthologous to human UVRAG (UV radiation resistance associated). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Uvrag in Genome Data Viewer
    Location:
    34B4-34B4; 2-48 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13286777..13289556)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13286777..13289556)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44083 Neighboring gene antisense RNA:CR44972 Neighboring gene DNA fragmentation factor-related protein 4 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene headbutt Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables SNARE binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in lytic vacuole IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    UV-resistance associated gene
    Names
    CG6116-PA
    CG6116-PB
    UV radiation resistance associated
    UV radiation resistance associated gene
    Uvrag-PA
    Uvrag-PB
    ultraviolet (UV) radiation resistance-associated gene

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13286777..13289556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135788.3NP_609632.1  UV-resistance associated gene, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609632.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VK07
      Related
      FBpp0080039
      Conserved Domains (1) summary
      pfam10186
      Location:329574
      Atg14; Vacuolar sorting 38 and autophagy-related subunit 14
    2. NM_001273512.1NP_001260441.1  UV-resistance associated gene, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260441.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PD33
      Conserved Domains (1) summary
      pfam10186
      Location:328573
      Atg14; Vacuolar sorting 38 and autophagy-related subunit 14