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    CG1840 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32150, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG1840provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030351
    Locus tag
    Dmel_CG1840
    See related
    AllianceGenome:FB:FBgn0030351
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    AAF48112; BcDNA:LD12750; Dmel\CG1840
    Summary
    Predicted to be involved in calcium ion transport and endoplasmic reticulum calcium ion homeostasis. Predicted to be active in Golgi apparatus and endoplasmic reticulum membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG1840 in Genome Data Viewer
    Location:
    10F4-10F4; 1-37 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (11888352..11889186)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11782385..11783219)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Selenoprotein G Neighboring gene severe impairment of CI with lengthened youth Neighboring gene wispy

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In silico identification of novel selenoproteins in the Drosophila melanogaster genome. Castellano S, et al. EMBO Rep, 2001 Aug. PMID 11493597, Free PMC Article
    2. The X-linked 1.688 Satellite in Drosophila melanogaster Promotes Specific Targeting by Painting of Fourth. Kim M, et al. Genetics, 2018 Feb. PMID 29242291, Free PMC Article
    3. Selenium metabolism in Drosophila: selenoproteins, selenoprotein mRNA expression, fertility, and mortality. Martin-Romero FJ, et al. J Biol Chem, 2001 Aug 10. PMID 11389138
    4. Targeting of Painting of fourth to roX1 and roX2 proximal sites suggests evolutionary links between dosage compensation and the regulation of the fourth chromosome in Drosophila melanogaster. Lundberg LE, et al. G3 (Bethesda), 2013 Aug 7. PMID 23733888, Free PMC Article
    5. Painting of Fourth and the X-Linked 1.688 Satellite in D. melanogaster is Involved in Chromosome-Wide Gene Regulation. Ekhteraei-Tousi S, et al. Cells, 2020 Jan 30. PMID 32019091, Free PMC Article

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in calcium ion transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in endoplasmic reticulum calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG1840-PA
    CG1840-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      11888352..11889186
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132536.2 → NP_572764.1  uncharacterized protein Dmel_CG1840, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572764.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VYS6
      Related
      FBpp0073415
      Conserved Domains (1) summary
      pfam10961
      Location:2 → 65
      DUF2763; Protein of unknown function (DUF2763)

    2. NM_001272545.1 → NP_001259474.1  uncharacterized protein Dmel_CG1840, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259474.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PED4
      Conserved Domains (1) summary
      pfam10961
      Location:2 → 64
      DUF2763; Protein of unknown function (DUF2763)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PED4 M9PED4
    Q9VYS6 Q9VYS6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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