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    eIF3c eukaryotic translation initiation factor 3 subunit c [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37005, updated on 9-Dec-2024

    Summary

    Official Symbol
    eIF3cprovided by FlyBase
    Official Full Name
    eukaryotic translation initiation factor 3 subunit cprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034258
    Locus tag
    Dmel_CG4954
    See related
    AllianceGenome:FB:FBgn0034258
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4954; Dmel\CG4954; eIF-3c; eIF3; eIF3-s8; eIF3-S8
    Summary
    Predicted to enable translation initiation factor binding activity. Predicted to contribute to translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be located in cytosol. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is expressed in several structures, including adult head; adult heart; ganglia; and spermatozoon. Orthologous to human EIF3C (eukaryotic translation initiation factor 3 subunit C) and EIF3CL (eukaryotic translation initiation factor 3 subunit C like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See eIF3c in Genome Data Viewer
    Location:
    54D4-54D4; 2-83 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17665678..17669275)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13553183..13556780)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Oxpecker Neighboring gene CCHamide-1 receptor Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    contributes_to translation initiation factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables translation initiation factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables translation initiation factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation initiation factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in translational initiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translational initiation ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    part_of eukaryotic translation initiation factor 3 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of eukaryotic translation initiation factor 3 complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of eukaryotic translation initiation factor 3 complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    eukaryotic translation initiation factor 3 subunit c
    Names
    CG4954-PA
    CG4954-PB
    eIF3-S8
    eIF3c-PA
    eIF3c-PB

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17665678..17669275
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299616.1NP_001286545.1  eukaryotic translation initiation factor 3 subunit c, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286545.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1ZAX1, Q8MR49
      UniProtKB/TrEMBL
      A0A0B4LFL2
      Conserved Domains (2) summary
      smart00753
      Location:744823
      PAM; PCI/PINT associated module
      pfam05470
      Location:24671
      eIF-3c_N; Eukaryotic translation initiation factor 3 subunit 8 N-terminus
    2. NM_137398.2NP_611242.1  eukaryotic translation initiation factor 3 subunit c, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611242.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A1ZAX1, Q8MR49
      UniProtKB/TrEMBL
      A0A0B4LFL2
      Related
      FBpp0086013
      Conserved Domains (2) summary
      smart00753
      Location:744823
      PAM; PCI/PINT associated module
      pfam05470
      Location:24671
      eIF-3c_N; Eukaryotic translation initiation factor 3 subunit 8 N-terminus