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    CG12857 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36642, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG12857provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033963
    Locus tag
    Dmel_CG12857
    See related
    AllianceGenome:FB:FBgn0033963
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12857
    Orthologs
    all
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    Genomic context

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    See CG12857 in Genome Data Viewer
    Location:
    51C2-51C2; 2-72 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (14757907..14759602, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (10645412..10647107, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) B15 subunit Neighboring gene TRAPP subunit 31 Neighboring gene Sprouty-related protein with EVH-1 domain Neighboring gene antisense RNA:CR42254 Neighboring gene Boundary element-associated factor of 32kD

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Ocnus is essential for male germ cell development in Drosophila melanogaster. Zheng Y, et al. Insect Mol Biol, 2018 Oct. PMID 29732657
    2. Loss of PAFAH1B2 reduces amyloid-β generation by promoting the degradation of amyloid precursor protein C-terminal fragments. Page RM, et al. J Neurosci, 2012 Dec 12. PMID 23238734, Free PMC Article
    3. Genomic organization of gypsy chromatin insulators in Drosophila melanogaster. Ramos E, et al. Genetics, 2006 Apr. PMID 16452134, Free PMC Article
    4. Next-generation large-scale binary protein interaction network for Drosophila melanogaster. Tang HW, et al. Nat Commun, 2023 Apr 15. PMID 37061542, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12857-PA
    CG12857-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      14757907..14759602 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274048.1 → NP_001260977.1  uncharacterized protein Dmel_CG12857, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260977.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KEQ4
      Conserved Domains (2) summary
      smart00875
      Location:215 → 278
      BACK; BTB And C-terminal Kelch
      cl02518
      Location:104 → 199
      BTB; BTB/POZ domain

    2. NM_137143.2 → NP_610987.1  uncharacterized protein Dmel_CG12857, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610987.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7JWV5
      Related
      FBpp0086598
      Conserved Domains (3) summary
      smart00875
      Location:215 → 313
      BACK; BTB And C-terminal Kelch
      pfam15881
      Location:327 → 415
      DUF4734; Domain of unknown function (DUF4734)
      cl02518
      Location:104 → 199
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KEQ4 A0A0B4KEQ4
    Q7JWV5 Q7JWV5

    Gene LinkOut

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