U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    T28C6.7 Kinesin motor domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177697, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    T28C6.7
    Official Full Name
    Kinesin motor domain-containing protein
    Primary source
    WormBase:WBGene00012121
    Locus tag
    CELE_T28C6.7
    See related
    AllianceGenome:WB:WBGene00012121
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in several structures, including excretory cell; intestine; nervous system; pharynx; and vulva. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See T28C6.7 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    22
    Sequence:
    Chromosome: IV; NC_003282.8 (8827800..8840675)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Nematode cuticle collagen N-terminal domain-containing protein Neighboring gene Membrane protein BRI3 Neighboring gene Uncharacterized protein Neighboring gene Centrosomal protein of 162 kDa Neighboring gene 50S ribosomal protein L17;Ribosomal_L30_N domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    2. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
    3. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    4. Depletion of endogenously biotinylated carboxylases enhances the sensitivity of TurboID-mediated proximity labeling in Caenorhabditis elegans. Artan M, et al. J Biol Chem, 2022 Sep. PMID 35933017, Free PMC Article
    5. Interactome analysis of Caenorhabditis elegans synapses by TurboID-based proximity labeling. Artan M, et al. J Biol Chem, 2021 Sep. PMID 34416233, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    Kinesin motor domain-containing protein
    NP_001255338.1
    • Confirmed by transcript evidence
    NP_001255339.1
    • Confirmed by transcript evidence
    NP_001294054.1
    • Confirmed by transcript evidence
    NP_001294055.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      8827800..8840675
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001268409.4 → NP_001255338.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255338.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22847
      Conserved Domains (2) summary
      COG1196
      Location:1304 → 2054
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl19219
      Location:1936 → 2018
      DUF342; Protein of unknown function (DUF342)

    2. NM_001268410.2 → NP_001255339.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001255339.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6KRI9
      Conserved Domains (2) summary
      COG1196
      Location:1306 → 2003
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cl19219
      Location:1922 → 2004
      DUF342; Protein of unknown function (DUF342)

    3. NM_001307125.3 → NP_001294054.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294054.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5M5W2
      Conserved Domains (3) summary
      COG1196
      Location:1308 → 2058
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:260 → 1006
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:1903 → 2231
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    4. NM_001307126.3 → NP_001294055.1  Kinesin motor domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001294055.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X5M900
      Conserved Domains (3) summary
      COG1196
      Location:1310 → 2007
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:260 → 1006
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      TIGR02169
      Location:1889 → 2217
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools