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    • Showing Current items.

    C25A1.1 FAM192A/Fyv6 N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172880, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C25A1.1
    Official Full Name
    FAM192A/Fyv6 N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00007705
    Locus tag
    CELE_C25A1.1
    See related
    AllianceGenome:WB:WBGene00007705
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be active in nucleus. Orthologous to human PSME3IP1 (proteasome activator subunit 3 interacting protein 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C25A1.1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (10162375..10163578)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene TPX2 domain-containing protein Neighboring gene Uncharacterized protein Neighboring gene mRNA cap guanine-N(7) methyltransferase Neighboring gene Fork-head domain-containing protein Neighboring gene ncRNA Neighboring gene RRM domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    FAM192A/Fyv6 N-terminal domain-containing protein
    NP_492675.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      10162375..10163578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060274.6 → NP_492675.1  FAM192A/Fyv6 N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492675.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O17594
      Conserved Domains (1) summary
      pfam10187
      Location:5 → 104
      Nefa_Nip30_N; N-terminal domain of NEFA-interacting nuclear protein NIP30
    Nucleotide Protein
    Heading Accession and Version

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