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    B0001.8 GTP pyrophosphokinase;SET domain-containing protein;Tudor domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178161, updated on 18-Sep-2024

    Summary

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    Official Symbol
    B0001.8
    Official Full Name
    GTP pyrophosphokinase;SET domain-containing protein;Tudor domain-containing protein
    Primary source
    WormBase:WBGene00007093
    Locus tag
    CELE_B0001.8
    See related
    AllianceGenome:WB:WBGene00007093
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See B0001.8 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    8
    Sequence:
    Chromosome: IV; NC_003282.8 (12138844..12141059, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene CABIT domain-containing protein;Immunoglobulin E-set;Iron-sulfur cluster assembly accessory protein Neighboring gene ncRNA Neighboring gene putative uridine-cytidine kinase;uridine/cytidine kinase Neighboring gene MABP domain-containing protein Neighboring gene DUF4210 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    GTP pyrophosphokinase;SET domain-containing protein;Tudor domain-containing protein
    NP_001263796.1
    • Confirmed by transcript evidence
    NP_001299935.1
    • Confirmed by transcript evidence
    NP_001355518.1
    • Confirmed by transcript evidence
    NP_502305.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      12138844..12141059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001276867.4 → NP_001263796.1  SET domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001263796.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      K8ESC8

    2. NM_001368446.4 → NP_001355518.1  Tudor domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A3P6NIB1
      Conserved Domains (1) summary
      pfam15301
      Location:209 → 271
      SLAIN; SLAIN motif-containing family

    3. NM_069904.7 → NP_502305.2  SET domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_502305.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8WQH2

    4. NM_001313006.3 → NP_001299935.1  GTP pyrophosphokinase [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3ARG5
    Nucleotide Protein
    Heading Accession and Version

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