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    T20D4.3 PAW domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 188639, updated on 9-Dec-2024

    Summary

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    Official Symbol
    T20D4.3
    Official Full Name
    PAW domain-containing protein
    Primary source
    WormBase:WBGene00020609
    Locus tag
    CELE_T20D4.3
    See related
    AllianceGenome:WB:WBGene00020609
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity. Predicted to be involved in glycoprotein catabolic process and positive regulation of BMP signaling pathway. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See T20D4.3 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    18
    Sequence:
    Chromosome: V; NC_003283.11 (3418228..3422779)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Arrestin C-terminal-like domain-containing protein Neighboring gene PAW domain-containing protein Neighboring gene Serpentine Receptor, class AB (Class A-like) Neighboring gene Serpentine Receptor, class AB (Class A-like)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in glycoprotein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PAW domain-containing protein
    NP_001309654.1
    • Confirmed by transcript evidence
    NP_001309655.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3418228..3422779
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001322513.3 → NP_001309654.1  PAW domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MB53
      Conserved Domains (1) summary
      smart00613
      Location:295 → 382
      PAW; domain present in PNGases and other hypothetical proteins

    2. NM_001322512.3 → NP_001309655.1  PAW domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MBP8
      Conserved Domains (1) summary
      smart00613
      Location:302 → 389
      PAW; domain present in PNGases and other hypothetical proteins
    Nucleotide Protein
    Heading Accession and Version

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