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    madf-5 Alcohol dehydrogenase transcription factor myb/sant-like protein [ Caenorhabditis elegans ]

    Gene ID: 175118, updated on 9-Dec-2024

    Summary

    Official Symbol
    madf-5
    Official Full Name
    Alcohol dehydrogenase transcription factor myb/sant-like protein
    Primary source
    WormBase:WBGene00007242
    Locus tag
    CELE_C01G12.1
    See related
    AllianceGenome:WB:WBGene00007242
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See madf-5 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (14573615..14576561)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Nematode Specific Peptide family, group B

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    part_of transcription regulator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    Alcohol dehydrogenase transcription factor myb/sant-like protein
    NP_497028.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14573615..14576561
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064627.6NP_497028.1  Alcohol dehydrogenase transcription factor myb/sant-like protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497028.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45233
      Conserved Domains (1) summary
      smart00595
      Location:1098
      MADF; subfamily of SANT domain