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    • Showing Current items.

    Y73C8C.8 RING-type domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 178753, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y73C8C.8
    Official Full Name
    RING-type domain-containing protein
    Primary source
    WormBase:WBGene00022265
    Locus tag
    CELE_Y73C8C.8
    See related
    AllianceGenome:WB:WBGene00022265
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in innate immune response. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y73C8C.8 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    6
    Sequence:
    Chromosome: V; NC_003283.11 (3110088..3113851, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Seven TM Receptor Neighboring gene pseudo Neighboring gene RING-type domain-containing protein Neighboring gene C-type lectin domain-containing protein Neighboring gene Serpentine Receptor, class T

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A genome-wide study of PDZ-domain interactions in C. elegans reveals a high frequency of non-canonical binding. Lenfant N, et al. BMC Genomics, 2010 Nov 26. PMID 21110867, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in innate immune response IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    RING-type domain-containing protein
    NP_503853.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      3110088..3113851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071452.4 → NP_503853.2  RING-type domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TXW5
      Conserved Domains (2) summary
      pfam13639
      Location:795 → 838
      zf-RING_2; Ring finger domain
      pfam12128
      Location:536 → 811
      DUF3584; Protein of unknown function (DUF3584)
    Nucleotide Protein
    Heading Accession and Version

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