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    Y71F9B.9 L-gulonate 3-dehydrogenase [ Caenorhabditis elegans ]

    Gene ID: 171839, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y71F9B.9
    Official Full Name
    L-gulonate 3-dehydrogenase
    Primary source
    WormBase:WBGene00022130
    Locus tag
    CELE_Y71F9B.9
    See related
    AllianceGenome:WB:WBGene00022130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable L-gulonate 3-dehydrogenase activity. Predicted to be involved in fatty acid metabolic process. Orthologous to human CRYL1 (crystallin lambda 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y71F9B.9 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    5
    Sequence:
    Chromosome: I; NC_003279.8 (2759023..2761044, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Serine/threonine-protein kinase plk-2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Mediator complex subunit 1;Mediator of RNA polymerase II transcription subunit 1.1 Neighboring gene Transmembrane protein Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables L-gulonate 3-dehydrogenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables NAD+ binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in fatty acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    L-gulonate 3-dehydrogenase
    NP_001122553.2
    • Confirmed by transcript evidence
    NP_491037.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      2759023..2761044 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_058636.7 → NP_491037.3  L-gulonate 3-dehydrogenase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_491037.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0VXV5
      Conserved Domains (3) summary
      PRK06129
      Location:3 → 311
      PRK06129; 3-hydroxyacyl-CoA dehydrogenase; Validated
      pfam00725
      Location:190 → 279
      3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
      pfam02737
      Location:6 → 185
      3HCDH_N; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

    2. NM_001129081.4 → NP_001122553.2  L-gulonate 3-dehydrogenase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001122553.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KZY2
      Conserved Domains (1) summary
      PRK06129
      Location:3 → 308
      PRK06129; 3-hydroxyacyl-CoA dehydrogenase; Validated
    Nucleotide Protein
    Heading Accession and Version

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