U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    cbn-1 EF-hand domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173423, updated on 9-Dec-2024

    Summary

    Official Symbol
    cbn-1
    Official Full Name
    EF-hand domain-containing protein
    Primary source
    WormBase:WBGene00019285
    Locus tag
    CELE_K01A2.11
    See related
    AllianceGenome:WB:WBGene00019285
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable calcium ion binding activity. [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See cbn-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    11
    Sequence:
    Chromosome: II; NC_003280.10 (328564..332519, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene CCDC92 domain-containing protein;CCDC92/74 N-terminal domain-containing protein Neighboring gene Beta-sarcoglycan Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Calponin-homology (CH) domain-containing protein;Transgelin

    General protein information

    Preferred Names
    EF-hand domain-containing protein
    NP_001022226.1
    • Confirmed by transcript evidence
    NP_493711.2
    • Confirmed by transcript evidence
    NP_493712.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      328564..332519 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027055.5NP_001022226.1  EF-hand domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022226.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KY97
      Conserved Domains (2) summary
      pfam13499
      Location:88142
      EF-hand_7; EF-hand domain pair
      cl08302
      Location:407461
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    2. NM_061310.6NP_493711.2  EF-hand domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493711.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KY96
      Conserved Domains (2) summary
      pfam13499
      Location:88142
      EF-hand_7; EF-hand domain pair
      cl08302
      Location:407461
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    3. NM_061311.6NP_493712.1  EF-hand domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493712.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZ47
      Conserved Domains (2) summary
      pfam13499
      Location:88142
      EF-hand_7; EF-hand domain pair
      cl08302
      Location:407461
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

    RNA

    1. NR_132575.1 RNA Sequence

      Status: REVIEWED