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    svop-1 Putative transporter svop-1 [ Caenorhabditis elegans ]

    Gene ID: 176250, updated on 9-Dec-2024

    Summary

    Official Symbol
    svop-1
    Official Full Name
    Putative transporter svop-1
    Primary source
    WormBase:WBGene00014021
    Locus tag
    CELE_ZK637.1
    See related
    AllianceGenome:WB:WBGene00014021
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Orthologous to human SVOP (SV2 related protein). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See svop-1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    10
    Sequence:
    Chromosome: III; NC_003281.10 (8882707..8885482, complement)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene FAM161 homolog famh-136 Neighboring gene putative RING finger protein ZK637.14 Neighboring gene Protein linkin Neighboring gene Uncharacterized protein

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane  

    General protein information

    Preferred Names
    Putative transporter svop-1
    NP_498960.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      8882707..8885482 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_066559.8 → NP_498960.2  Putative transporter svop-1 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_498960.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P30638, Q21101
      Conserved Domains (2) summary
      cd06174
      Location:87 → 508
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      TIGR00898
      Location:16 → 514
      2A0119; cation transport protein
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