Nrip3 nuclear receptor interacting protein 3 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Nrip3provided by RGD
Official Full Name: nuclear receptor interacting protein 3provided by RGD
Primary source: RGD:1304777
See related: AllianceGenome:RGD:1304777
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Orthologous to human NRIP3 (nuclear receptor interacting protein 3). [provided by Alliance of Genome Resources, Dec 2024]
Expression: Biased expression in Brain (RPKM 252.7), Kidney (RPKM 86.4) and 5 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 1q33

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	1	NC_086019.1 (173224532..173249829, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	1	NC_051336.1 (163789738..163815036, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	1	NC_005100.4 (174385424..174411141, complement)

Chromosome 1 - NC_086019.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

RH143727 (e-PCR)
- UniSTS:232973

BE105406 (e-PCR)
- UniSTS:245827

RH128992 (e-PCR)
- UniSTS:212300

AI228775 (e-PCR)
- UniSTS:261781

Gene Ontology Provided by RGD

Function	Evidence Code	Pubs
enables aspartic-type endopeptidase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in proteolysis	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nuclear receptor-interacting protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001108498.1 → NP_001101968.1 nuclear receptor-interacting protein 3

See identical proteins and their annotated locations for NP_001101968.1

Status: PROVISIONAL

Source sequence(s)

CH473956

UniProtKB/TrEMBL

A6I7Z1, D4A2K5

Conserved Domains (1) summary

cd05480
Location:109 → 211

NRIP_C; NRIP_C; putative nuclear receptor interacting protein