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    Gm3858 predicted gene 3858 [ Mus musculus (house mouse) ]

    Gene ID: 100042465, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Gm3858provided by MGI
    Official Full Name
    predicted gene 3858provided by MGI
    Primary source
    MGI:MGI:3782030
    See related
    Ensembl:ENSMUSG00000118638 AllianceGenome:MGI:3782030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm1717
    Summary
    Orthologous to human CXorf49 (chromosome X open reading frame 49) and CXorf49B (chromosome X open reading frame 49B). [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Restricted expression toward testis adult (RPKM 1.0) See more
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    Genomic context

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    See Gm3858 in Genome Data Viewer
    Location:
    X D; X
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (100861802..100865422, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (101818196..101821816, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 8030474K03 gene Neighboring gene ribosomal protein SA pseudogene Neighboring gene H3.3 histone A, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_47663 Neighboring gene STARR-seq mESC enhancer starr_47664 Neighboring gene NHS like 2 Neighboring gene predicted gene, 25828

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein CXorf49 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      100861802..100865422 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055019665.1 → XP_054875640.1  uncharacterized protein CXorf49 homolog

      UniProtKB/TrEMBL
      A0A668KLC8
      Related
      ENSMUSP00000159230.2, ENSMUST00000239206.2
    Nucleotide Protein Strain
    Heading Accession and Version

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