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    gutQ D-arabinose 5-phosphate isomerase GutQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947587, updated on 17-Dec-2024

    Summary

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    Official Symbol
    gutQ
    Official Full Name
    D-arabinose 5-phosphate isomerase GutQ
    Primary source
    ECOCYC:EG10973
    Locus tag
    b2708
    See related
    ASAP:ABE-0008902
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2703; srlQ
    Summary
    GutQ is homologous to KpsF and KdsD. [More information is available at EcoGene: EG10973]. gutQ encodes the second of two D-arabinose 5-phosphate isomerases (API) in Escherichia coli. [More information is available at EcoCyc: EG10973].
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    Genomic context

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    Sequence:
    NC_000913.3 (2829813..2830778)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sorbitol-6-phosphate 2-dehydrogenase Neighboring gene DNA-binding transcriptional activator GutM Neighboring gene DNA-binding transcriptional repressor SrlR Neighboring gene DNA-binding transcriptional dual regulator NorR Neighboring gene anaerobic nitric oxide reductase flavorubredoxin Neighboring gene NADH:flavorubredoxin reductase Neighboring gene carbamoyl--[HypE] ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reduced polysialic acid capsule expression in Escherichia coli K1 mutants with chromosomal defects in kpsF. Cieslewicz M, et al. Mol Microbiol, 1997 Oct. PMID 9383150
    2. Cloning, sequencing, expression, and complementation analysis of the Escherichia coli K1 kps region 1 gene, kpsE, and identification of an upstream open reading frame encoding a protein with homology to GutQ. Cieslewicz MJ, et al. J Bacteriol, 1993 Dec. PMID 8253690, Free PMC Article
    3. Nucleotide sequence and expression of the gutQ gene within the glucitol operon of Escherichia coli. Yamada M, et al. DNA Seq, 1990. PMID 2134185
    4. Identification of GutQ from Escherichia coli as a D-arabinose 5-phosphate isomerase. Meredith TC, et al. J Bacteriol, 2005 Oct. PMID 16199563, Free PMC Article
    5. Redefining the requisite lipopolysaccharide structure in Escherichia coli. Meredith TC, et al. ACS Chem Biol, 2006 Feb 17. PMID 17163638

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables arabinose-5-phosphate isomerase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables arabinose-5-phosphate isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables carbohydrate derivative binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate derivative metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within keto-3-deoxy-D-manno-octulosonic acid biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in keto-3-deoxy-D-manno-octulosonic acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in lipopolysaccharide biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within protein homotetramerization IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within single-species biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    D-arabinose 5-phosphate isomerase GutQ
    NP_417188.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2829813..2830778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417188.4 D-arabinose 5-phosphate isomerase GutQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417188.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C3SXX7, D0VEX7
      Conserved Domains (1) summary
      PRK11543
      Location:1 → 321
      gutQ; arabinose-5-phosphate isomerase GutQ
    Nucleotide Protein
    Heading Accession and Version

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