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    araE arabinose:H(+) symporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947341, updated on 3-Dec-2024

    Summary

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    Official Symbol
    araE
    Official Full Name
    arabinose:H(+) symporter
    Primary source
    ECOCYC:EG10056
    Locus tag
    b2841
    See related
    ASAP:ABE-0009319
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2839
    Summary
    Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG10056]. AraE is an arabinose/proton symporter responsible for the uptake of arabinose. [More information is available at EcoCyc: EG10056].
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    Genomic context

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    Sequence:
    NC_000913.3 (2980764..2982182, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene diaminopimelate decarboxylase Neighboring gene DNA-binding transcriptional dual regulator LysR Neighboring gene amino acid racemase YgeA Neighboring gene putative 2-keto-3-deoxy-D-gluconate dehydrogenase Neighboring gene 5-dehydro-4-deoxy-D-glucuronate isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mutations affecting catabolite repression of the L-arabinose regulon in Escherichia coli B/r. Heffernan L, et al. J Bacteriol, 1976 Jun. PMID 181362, Free PMC Article
    2. Assay, genetics, proteins, and reconstitution of proton-linked galactose, arabinose, and xylose transport systems of Escherichia coli. Henderson PJ, et al. Methods Enzymol, 1986. PMID 3520228
    3. Identification of the AraE transport protein of Escherichia coli. MacPherson AJ, et al. Biochem J, 1981 Apr 15. PMID 7030324, Free PMC Article
    4. Arm-domain interactions can provide high binding cooperativity. Schleif R, et al. Protein Sci, 2004 Oct. PMID 15388867, Free PMC Article
    5. Mammalian and bacterial sugar transport proteins are homologous. Maiden MC, et al. Nature, 1987 Feb 12-18. PMID 3543693

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables L-arabinose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables L-arabinose transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables fucose transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables fucose transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables symporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within L-arabinose transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within L-arabinose transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within fucose transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within fucose transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    arabinose:H(+) symporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2980764..2982182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417318.1 arabinose:H(+) symporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417318.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8H9VNX7
      Conserved Domains (1) summary
      TIGR00879
      Location:6 → 457
      SP; MFS transporter, sugar porter (SP) family
    Nucleotide Protein
    Heading Accession and Version

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