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    rplI 50S ribosomal subunit protein L9 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948720, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rplI
    Official Full Name
    50S ribosomal subunit protein L9
    Primary source
    ECOCYC:EG10870
    Locus tag
    b4203
    See related
    ASAP:ABE-0013746
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4199
    Summary
    The L9 protein is a component of the 50S subunit of the ribosome. [More information is available at EcoCyc: EG10870].
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    Genomic context

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    Sequence:
    NC_000913.3 (4426108..4426557)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene primosomal replication protein N Neighboring gene 30S ribosomal subunit protein S18 Neighboring gene DUF2686 domain-containing protein YjfZ Neighboring gene pseudo Neighboring gene cell division protein YtfB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Escherichia coli large ribosomal subunit at 7.5 A resolution. Matadeen R, et al. Structure, 1999 Dec 15. PMID 10647188
    2. Cluster of ribosomal protein genes in Escherichia coli containing genes for proteins S6, S18, and L9. Isono K, et al. Proc Natl Acad Sci U S A, 1978 Dec. PMID 366612, Free PMC Article
    3. The priB gene encoding the primosomal replication n protein of Escherichia coli. Allen GC Jr, et al. J Biol Chem, 1991 Jun 25. PMID 1646811
    4. The nucleotide sequence of an Escherichia coli chromosomal region containing the genes for ribosomal proteins S6, S18, L9 and an open reading frame. Schnier J, et al. Mol Gen Genet, 1986 Jul. PMID 3528756
    5. Morphological variation of individual Escherichia coli 50S ribosomal subunits in situ, as revealed by cryo-electron tomography. Zhao Q, et al. Exp Cell Res, 2004 Oct 15. PMID 15383326

    See all (34) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: '98 Escherichia coli SWISS-2DPAGE database update.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    50S ribosomal subunit protein L9

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4426108..4426557
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418624.1 50S ribosomal subunit protein L9 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418624.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAN3Q2L5
      Conserved Domains (1) summary
      PRK00137
      Location:1 → 149
      rplI; 50S ribosomal protein L9; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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