U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ykfC PF00078 domain-containing protein YkfC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944940, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ykfC
    Official Full Name
    PF00078 domain-containing protein YkfC
    Primary source
    ECOCYC:G6133
    Locus tag
    b0258
    See related
    ASAP:ABE-0000885
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0260
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (272847..273992)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS30 family transposase Neighboring gene ncRNA Neighboring gene IS5 family transposase and trans-activator Neighboring gene S-methyl-L-methionine transporter Neighboring gene homocysteine S-methyltransferase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Linkage map of Escherichia coli K-12, edition 10: the physical map. Rudd KE. Microbiol Mol Biol Rev, 1998 Sep. PMID 9729612, Free PMC Article
    2. Genomic changes arising in long-term stab cultures of Escherichia coli. Faure D, et al. J Bacteriol, 2004 Oct. PMID 15375124, Free PMC Article
    3. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    PF00078 domain-containing protein YkfC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      272847..273992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518741.1 PF00078 domain-containing protein YkfC [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A788P3Z8
      Conserved Domains (1) summary
      cl02808
      Location:35 → 361
      RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.