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    ychN DsrE/F sulfur relay family protein YchN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945794, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ychN
    Official Full Name
    DsrE/F sulfur relay family protein YchN
    Primary source
    ECOCYC:EG12404
    Locus tag
    b1219
    See related
    ASAP:ABE-0004091
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1213
    Summary
    Possibly involved in intracellular sulfur reduction (COG1553). [More information is available at EcoGene: EG12404]. A crystal structure of YchN has been determined at 2.8 resolution . [More information is available at EcoCyc: EG12404].
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    Genomic context

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    Sequence:
    NC_000913.3 (1273246..1273599, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative cation transport regulator ChaB Neighboring gene glutathione-specific gamma-glutamylcyclotransferase Neighboring gene putative invasin YchO Neighboring gene DNA-binding transcriptional dual regulator NarL Neighboring gene sensor histidine kinase NarX

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystal structure of a conserved hypothetical protein from Escherichia coli. Shin DH, et al. J Struct Funct Genomics, 2002. PMID 12836674
    2. Proteomic analysis of protein-protein interactions within the Cysteine Sulfinate Desulfinase Fe-S cluster biogenesis system. Bolstad HM, et al. J Proteome Res, 2010 Oct 1. PMID 20734996, Free PMC Article
    3. Structural basis for sulfur relay to RNA mediated by heterohexameric TusBCD complex. Numata T, et al. Structure, 2006 Feb. PMID 16472754
    4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables identical protein binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of protein-containing complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DsrE/F sulfur relay family protein YchN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1273246..1273599 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415737.1 DsrE/F sulfur relay family protein YchN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415737.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0FWL0
      Conserved Domains (1) summary
      COG1553
      Location:2 → 117
      DsrE; Sulfur relay (sulfurtransferase) complex TusBCD TusD component, DsrE family [Inorganic ion transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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