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    ydaW putative uncharacterized protein YdaW [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945927, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydaW
    Official Full Name
    putative uncharacterized protein YdaW
    Primary source
    ECOCYC:G6685
    Locus tag
    b1361
    See related
    ASAP:ABE-0004562
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1359
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    Genomic context

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    Sequence:
    NC_000913.3 (1422752..1423312)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1376 domain-containing protein YdaU Neighboring gene putative ATP-binding protein YdaV Neighboring gene pseudo Neighboring gene putative prophage outer membrane lipoprotein RzoR Neighboring gene K(+) transporter TrkG

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative uncharacterized protein YdaW

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1422752..1423312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518776.1 putative uncharacterized protein YdaW [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      Conserved Domains (2) summary
      COG1321
      Location:1 → 48
      MntR; Mn-dependent transcriptional regulator, DtxR family [Transcription]
      pfam07789
      Location:88 → 151
      DUF1627; Protein of unknown function (DUF1627)
    Nucleotide Protein
    Heading Accession and Version

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