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    CG7841 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39672, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CG7841provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036502
    Locus tag
    Dmel_CG7841
    See related
    AllianceGenome:FB:FBgn0036502
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG7841
    Summary
    Is expressed in several structures, including dorsal pharyngeal muscle primordium; embryonic/larval midgut primordium; gut section; larval muscle cell; and trunk visceral muscle primordium. Orthologous to human MCRIP2 (MAPK regulated corepressor interacting protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG7841 in Genome Data Viewer
    Location:
    71D3-71D3; 3-43 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (15505188..15508252, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (15498288..15501352, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene gdl-ORF39 Neighboring gene Z600 Neighboring gene gonadal Neighboring gene Methionine sulfoxide reductase A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Forward Genetic Approach to Mapping a P-Element Second Site Mutation Identifies DCP2 as a Novel Tumor Suppressor in Drosophila melanogaster. Mishra R, et al. G3 (Bethesda), 2020 Aug 5. PMID 32591349, Free PMC Article
    2. Selection for long and short sleep duration in Drosophila melanogaster reveals the complex genetic network underlying natural variation in sleep. Harbison ST, et al. PLoS Genet, 2017 Dec. PMID 29240764, Free PMC Article
    3. Latitudinal clines in gene expression and cis-regulatory element variation in Drosophila melanogaster. Juneja P, et al. BMC Genomics, 2016 Nov 28. PMID 27894253, Free PMC Article
    4. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG7841-PA
    CG7841-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      15505188..15508252 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274947.1 → NP_001261876.1  uncharacterized protein Dmel_CG7841, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261876.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VUP0
      Conserved Domains (2) summary
      pfam14799
      Location:49 → 168
      FAM195; FAM195 family
      cl23960
      Location:2 → 77
      DUF2807; Putative auto-transporter adhesin, head GIN domain

    2. NM_140513.4 → NP_648770.1  uncharacterized protein Dmel_CG7841, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648770.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VUP0
      Related
      FBpp0075357
      Conserved Domains (2) summary
      pfam14799
      Location:49 → 168
      FAM195; FAM195 family
      cl23960
      Location:2 → 77
      DUF2807; Putative auto-transporter adhesin, head GIN domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VUP0 Q9VUP0

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