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    Saa4 serum amyloid A 4 [ Mus musculus (house mouse) ]

    Gene ID: 20211, updated on 9-Dec-2024

    Summary

    Official Symbol
    Saa4provided by MGI
    Official Full Name
    serum amyloid A 4provided by MGI
    Primary source
    MGI:MGI:98224
    See related
    Ensembl:ENSMUSG00000040017 AllianceGenome:MGI:98224
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Saa-4; Saa-5
    Summary
    Is expressed in extraembryonic component and placenta. Orthologous to several human genes including SAA4 (serum amyloid A4, constitutive). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in liver adult (RPKM 29.6), liver E18 (RPKM 9.3) and 3 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Saa4 in Genome Data Viewer
    Location:
    7 B3; 7 30.53 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (46377416..46382027, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (46727992..46732603, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene serum amyloid A 3 Neighboring gene predicted gene, 31882 Neighboring gene serum amyloid A, pseudogene Neighboring gene serum amyloid A 1

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    General protein information

    Preferred Names
    serum amyloid A-4 protein
    Names
    amyloid A-5 protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011316.4NP_035446.1  serum amyloid A-4 protein precursor

      See identical proteins and their annotated locations for NP_035446.1

      Status: VALIDATED

      Source sequence(s)
      AC090122, CJ134068
      Consensus CDS
      CCDS21283.1
      UniProtKB/Swiss-Prot
      P31532
      Related
      ENSMUSP00000006952.8, ENSMUST00000006952.9
      Conserved Domains (1) summary
      smart00197
      Location:21130
      SAA; Serum amyloid A proteins

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      46377416..46382027 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)